I do know that something like 40% of the water supply is locked to environmental use (preserving habitats, maintaining flow for the salmon spawn, etc), but a lot of that is in the wet northern portion of the state and is mostly unconnected to the rest of the state, hydrologically.
And I can't begin to tell you how many things are wrong with that LA Times article, starting with that "About 75% of water used in the state goes to agriculture" bit. To get that, it A) had to be talking only about the allocated and used water and not the water supply in general, it had to exclude any and all environmental use so that it was only talking about agricultural and urban use, and then it had to be talking about gross use and not net so it's not counting water returned back into the system. And that's just the first error in the article.
If you care to go browsing sources, I suggest you start with this one
http://www.ppic.org/content/pubs/rep...HChapter2R.pdf